Add map for Q

pipeline_disk.py

@@ -14,18 +14,21 @@ storage_out = "/dsm/anais/storageA/"
 
 parser = argparse.ArgumentParser()
 parser.add_argument("runs", help="name of runs", nargs="*", default=["015_iso"])
-parser.add_argument(
-    "-f", "--first_output", help="id of first output", type=int, default=1
-)
-parser.add_argument(
-    "-l", "--last_output", help="id of last output", type=int, default=100
-)
+parser.add_argument("-b", "--begin", help="id of first output", type=int, default=1)
+parser.add_argument("-e", "--end", help="id of last output", type=int, default=100)
 parser.add_argument("-s", "--step", help="step between two output", type=int, default=1)
 parser.add_argument(
     "-d", "--disk", help="do specific disk radial analysis", action="store_true"
 )
 parser.add_argument("-p", "--project", help="specify project name", default="disk")
 
+parser.add_argument(
+    "-fr",
+    "--force_redo",
+    help="redo plots even if the files already exist",
+    action="store_true",
+)
+
 parser.add_argument(
     "-w", "--watch", help="wait and watch for missing outputs", action="store_true"
 )
@@ -52,8 +55,8 @@ folder = "simus"
 project = args.project
 runs = args.runs
 
-first = args.first_output
-last = args.last_output
+first = args.begin
+last = args.end
 step = args.step
 
 
@@ -74,13 +77,23 @@ for run in runs:
         while not success:
             try:
                 dp.make_image_disk(
-                    path_in, i, path_out=path_out, tag=run, map_size=1024
+                    path_in,
+                    i,
+                    path_out=path_out,
+                    tag=run,
+                    map_size=1024,
+                    force=args.force_redo,
                 )
                 if args.disk:
                     dp.disk_prop(
-                        path_in, i, path_out=path_out, rad_ext=1, nb_bin=50, force=False
+                        path_in,
+                        i,
+                        path_out=path_out,
+                        rad_ext=1,
+                        nb_bin=50,
+                        force=args.force_redo,
                     )
-                    dp.plot_disk_prop(path_out, i, tag=run)
+                    dp.plot_disk_prop(path_out, i, tag=run, force=args.force_redo)
                 success = True
             except ValueError:
                 if args.watch and failures < args.allowed_failures: