improve format

baseprocessor.py

@@ -1,37 +1,42 @@
 # coding: utf-8
 
-import sys
-import os
-import glob as glob
 import copy
+import glob as glob
+import os
+import subprocess
+import sys
 import time
-import tables
-from tables import HDF5ExtError
+from abc import ABCMeta, abstractmethod
+from functools import partial
 
-import pymses
 import numpy as np
-from numpy.polynomial.polynomial import polyfit
-from scipy.stats import linregress
-
-from pymses.sources.ramses import output
-from pymses.sources.hop.file_formats import *
-from pymses.analysis import Camera, raytracing, slicing, splatting
-from pymses.filters import CellsToPoints
-from pymses.analysis import ScalarOperator, FractionOperator, MaxLevelOperator
+import pymses
+import tables
 from astrophysix.simdm import SimulationStudy
 from astrophysix.simdm.experiment import (
-    Simulation,
     AppliedAlgorithm,
     ParameterSetting,
     ParameterVisibility,
+    Simulation,
 )
 from astrophysix.simdm.results import GenericResult, Snapshot
+from numpy.polynomial.polynomial import polyfit
+from pymses.analysis import (
+    Camera,
+    FractionOperator,
+    MaxLevelOperator,
+    ScalarOperator,
+    raytracing,
+    slicing,
+    splatting,
+)
+from pymses.filters import CellsToPoints
+from pymses.sources.hop.file_formats import *
+from pymses.sources.ramses import output
+from scipy.stats import linregress
+from tables import HDF5ExtError
+
 from ramses_astrophysix import ramses
-
-import subprocess
-from functools import partial
-from abc import ABCMeta, abstractmethod
-
 from run_selector import *
 from units import *
 
@@ -429,6 +434,15 @@ class HDF5Container(BaseProcessor):
 
         name = transform_name + "_" + rule_src_name
 
+        self.rules[name] = Rule(
+            self,
+            fn,
+            group=group,
+            unit=unit,
+            description=description,
+            dependencies=[rule_src_name],
+        )
+
     def apply(
         self,
         fn,