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Add filaments postproc, improve units detection, add automatic map rules, add selection

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This commit is contained in:
Noe Brucy
2020-10-16 17:44:34 +02:00
parent 013aab911e
commit e05477cb7a
7 changed files with 867 additions and 211 deletions
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pp_params.yml
+18 -5
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@@ -22,9 +22,21 @@ disk: # Disk speficic parameters
pdf: # parameters for probability density functions
nb_bin : 50 # Number of bins for the PDF
xmin_fit : 0. # Lower boundary of the fit
xmax_fit : 1.25 # Upper boundary of the fit
nb_bin : 100 # Number of bins for the PDF
range : [-1.5, 2.5] # Range of the PDF (log of fluctuation)
xmin_fit : 0. # Lower boundary of the fit (log of fluctuation)
xmax_fit : 1.25 # Upper boundary of the fit (log of fluctuation)
filaments: # parameters for FilFinder
datamap : "rho_avg"
verbose : False
rmin : 0.15 # In fraction of the box (zoom to be taken into account)
rmax : 0.45 # In fraction of the box (idem)
size_thresh : 200 # in pixels**2
skel_thresh : 100 # in pixels
branch_thresh : 100 # in pixels
glob_thresh : 40 # in map unit
pymses: # Parameters for Pymses reader
@@ -56,7 +68,8 @@ input: # Parameters on how to look for input files (= output from Ramses)
out: # Parameters for post processing
tag : "" # Tag for the image
interactive : False # Interactive mode (do not save the plots on the disk)
interactive : False # Interactive mode (keep figures open)
save : True # Save the plots on the disk
ext : '.jpeg' # extension for plots
fmt : "" # Format of the output filename for plots
# The following keys are accepted
@@ -70,7 +83,7 @@ out: # Parameters for post processing
process: # General setting of the post-processor module
verbose : True # Give more infos on what is going on
verbose : False # Give more infos on what is going on
num_process : 1 # Number of forks
save_cells : True # Save cells structure on disk
unload_cells : True # Save memory usage