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pipeline/pp_params.yml
T
2020-12-14 16:58:52 +01:00

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YAML

plot : # Plot parameters
put_title : False # Add a title to plot
# Maps
ntick : 6 # Number of ticks for maps
# Overlays
vel_red : 40 # Take point each vel_red for velocities
time_fmt : "time = {:.3g} {}" # Time format string, 1st field is time and 2nd is unit
disk: # Disk speficic parameters
enable : False # Enable specific disk analysis
pos_star : [1., 1., 1.] # Position of the central star
binning : "log" # Kind of binning (lin : linear, log : logarithmic)
mass_star : 1. # Mass of the central star
nb_bin : 100 # Number of bins for averaged quantities
bin_in : 1e-3 # Outer radius of the inner bin
bin_out : 0.25 # Inner radius of the outer bin
rmin_pdf : 0.075 # Inner radius for PDF computation
rmax_pdf : 0.3 # Outer radius for PDF computation
pdf: # parameters for probability density functions
nb_bin : 200 # Number of bins for the PDF
range : [-1.5, 2.5] # Range of the PDF (log of fluctuation)
xmin_fit : 0.1 # Lower boundary of the fit (log of fluctuation)
xmax_fit : 1.5 # Upper boundary of the fit (log of fluctuation)
fit_cut : 1e-4 # Exclude value that are < fit_cut * maximum
filaments: # parameters for FilFinder
datamap : "rho_avg"
verbose : False
rmin : 0.15 # In fraction of the box (zoom to be taken into account)
rmax : 0.45 # In fraction of the box (idem)
size_thresh : 200 # in pixels**2
skel_thresh : 100 # in pixels
branch_thresh : 100 # in pixels
glob_thresh : 40 # in map unit
pymses: # Parameters for Pymses reader
# Source settings
variables : ["rho","vel","Br","Bl","P", "g", "phi"] # Read these variables
order : '<' # Bit order
# Processing options
levelmax : 20 # Maximal AMR level visited when looking levels
fft : False # Quick and dirty rendering using FFT
verbose : False # Let pymses write on standart output
multiprocessing : True # Whether to use multiprocessing
# Camera settings
center : [0.5, 0.5, 0.5] # Center of the image
zoom : 1. # Zoom of the image
map_size : 1024 # Size of the computed maps in pixel
# Filter parameters
filter : False # Enable filtering
min_coords : [0.35, 0.35, 0.45]
max_coords : [0.65, 0.65, 0.55]
input: # Parameters on how to look for input files (= output from Ramses)
log_prefix : "run.log" # Prefix of the log file
label_filename : "label.txt" # Name of the label file
nml_filename : "run.nml" # name of the namelist file
out: # Parameters for post processing
tag : "" # Tag for the image
interactive : False # Interactive mode (keep figures open)
save : True # Save the plots on the disk
ext : '.jpeg' # extension for plots
fmt : "" # Format of the output filename for plots
# The following keys are accepted
# {out} : The output directory (where hdf5 files are also stored)
# {run} : Name of the relevant run
# {num} : Name of the input file (from Ramses)
# {ext} : Extension defined above
# {name} : Name of the rule
# {tag} : Tag defined above
# {nml[nml_key]} : The value of nml_key in the namelist (ex: amr_params/levelmin)
process: # General setting of the post-processor module
verbose : False # Give more infos on what is going on
num_process : 1 # Number of forks
save_cells : True # Save cells structure on disk
unload_cells : True # Save memory usage
rules: # Specific rules parameters
turb_energy_threshold : -1 # Remove invalid data (<0 = no threshold)